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Posts
Position I: Postdoctoral Fellow (博士后)
Published:
现根据课题需要招聘博士后2-3名，详细情况见链接内。
- 拥有或即将具有博士研究生学历、专业背景不限。其中拥有生物信息学、化学信息学、生物学、化学、药学、数学、计算机科学、人工智能等相关专业的博士学位者优先考虑；
- 以第一作者或共同第一作者在相关研究方向的学术期刊发表过或即将发表研究论文；
- 具有优秀的中英文写作以及沟通能力，可独立完成SCI论文以及中文申报书的写作；
- 热爱科研、责任心强、学习能力强、拥有良好的团队精神与合作意识；
- 熟练掌握一种以上编程语言，熟悉深度学习模型开发，熟悉分子对接和分子动力学模拟者优先考虑；
- 熟练掌握细胞生物学实验，分子生物学实验，生物物理学实验，动物实验，高通量测序技术开发者优先考虑。
Position II: Graduate Student (硕士/博士研究生)
Published:
现根据课题需要招聘硕士或博士研究生若干，详细情况见链接内。
- 按照中国药科大学的招生要求取得硕士或博士研究生入学资格；
- 具有良好的中英文写作以及沟通能力，可协助完成科学基金和学术论文的写作；
- 热爱科研、责任心强、学习能力强、拥有良好的团队精神与合作意识；
- 具有一定编程、计算机、以及深度学习基础者优先考虑；
- 具有一定细胞生物学实验，分子生物学实验，生物物理学实验、小鼠实验、高通量测序技术基础者优先考虑。
Position III: Research Assistant (科研助理)
Published:
现根据课题需要招聘科研助理若干，详细情况见链接内。
- 具有本科及以上学历，专业背景不限，其中具有生物信息学、化学信息学、生物学、药学、化学、数学、计算机科学、人工智能等研究背景的优先考虑；
- 具有一定的中英文阅读、写作和沟通能力；
- 热爱科研、责任心强、学习能力强、拥有良好的团队精神与合作意识；
- 具有编程、深度学习模型开发、软件开发经验者优先考虑；
- 具有细胞生物学实验，分子生物学实验，生物物理学实验、小鼠实验、高通量测序技术经验者优先考虑。
Position IV: Intern Student (实习生)
Published:
欢迎对课题组研究感兴趣，热爱科研，诚实可信，学习能力强的实习生加入，详细情况见链接内。
- 本科或研究生在读，专业背景不限，可保证固定的工作时间投入；
- 具有基础的英文文献阅读能力，通过大学英语四六级；
- 具有基础的编程和深度学习能力者优先考虑；
- 具有基础的湿实验经验者优先考虑；
- 工作严谨认真，善于沟通合作，具有良好学术道德，为人诚信。
portfolio
Portfolio item number 1
Short description of portfolio item number 1
Portfolio item number 2
Short description of portfolio item number 2
publications
DPMIND: degradome-based plant miRNA-target interaction and network database
Published in Bioinformatics, 2017
Recommended citation: Fei Y, Wang R, Li H, Liu S, Zhang H, Huang J#. DPMIND: degradome-based plant miRNA-target interaction and network database. Bioinformatics, 34(9): 1618–1620, 2018.
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Construction and analysis of degradome-dependent microRNA regulatory networks in soybean
Published in BMC Genomics, 2018
Recommended citation: Wang R, Yang Z, Fei Y, Feng J, Zhu H, Huang F, Zhang H, Huang J#. Construction and analysis of degradome-dependent microRNA regulatory networks in soybean. BMC Genomics, 20(1): 534, 2019.
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WPMIAS: Whole-degradome-based Plant MicroRNA-target Interaction Analysis Server
Published in Bioinformatics, 2019
Recommended citation: Fei Y, Mao Y, Shen C, Wang R, Zhang H, Huang J#. WPMIAS: Whole-degradome-based Plant MicroRNA-target Interaction Analysis Server. Bioinformatics, 36(6): 1937–1939, 2020.
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poly(UG)-tailed RNAs in genome protection and epigenetic inheritance
Published in Nature, 2020
Recommended citation: Shukla A*, Yan J*, Pagano D J, Dodson A E, Fei Y, Gorham J, Seidman J G, Wickens M, Kennedy S#. poly(UG)-tailed RNAs in genome protection and epigenetic inheritance. Nature, 582(7811): 283–288, 2020.
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A Conserved NRDE-2/MTR-4 Complex Mediates Nuclear RNAi in Caenorhabditis elegans
Published in Genetics, 2020
Recommended citation: Wan G, Yan J, Fei Y, Pagano D J, Kennedy S#. A Conserved NRDE-2/MTR-4 Complex Mediates Nuclear RNAi in Caenorhabditis elegans. Genetics, 216(4): 1071-1085, 2020.
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ZSP-1 is a Z Granule Surface Protein Required for Z Granule Fluidity and Germline Immortality in C. elegans
Published in EMBO Journal, 2021
Recommended citation: Wan G #, Bajaj L, Fields B, Dodson A E, Pagano D J, Fei Y, Kennedy S #. ZSP-1 is a Z Granule Surface Protein Required for Z Granule Fluidity and Germline Immortality in C. elegans. EMBO Journal, 40(3): e105612, 2021.
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PhasiRNAnalyzer: an integrated analyser for plant phased siRNA
Published in RNA Biology, 2021
Recommended citation: Fei Y, Feng J, Wang R, Zhang B, Zhang H, Huang J#. PhasiRNAnalyzer: an integrated analyser for plant phased siRNA. RNA Biology, 18(11): 1622–1629, 2021.
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RiceNCexp: a rice non-coding RNA co-expression atlas based on massive RNA-seq and small-RNA seq data
Published in Journal of Experimental Botany, 2022
Recommended citation: Zhang B, Fei Y, Feng J, Zhu X, Wang R, Xiao H, Zhang H, Huang J#. RiceNCexp: a rice non-coding RNA co-expression atlas based on massive RNA-seq and small-RNA seq data. Journal of Experimental Botany, 73(18): 6068–6077, 2022.
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Advances and opportunities in RNA structure experimental determination and computational modeling
Published in Nature Methods, 2022
Recommended citation: Zhang J*, Fei Y*, Sun L #, Zhang Q C#. Advances and opportunities in RNA structure experimental determination and computational modeling. Bioinformatics, 19(10): 1193–1207, 2022.
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RNA structural dynamics modulate EGFR-TKI resistance through controlling YRDC translation in NSCLC cells
Published in Genomics, Proteomics & Bioinformatics, 2022
Recommended citation: Shi B*, An K*, Wang Y, Fei Y, Guo C, Zhang Q C, Yang Y, Tian X, Kan Q#. RNA Structural Dynamics Modulate EGFR-TKI Resistance Through Controlling YRDC Translation in NSCLC Cells. Genomics, Proteomics & Bioinformatics, 21(4): 850–865, 2023.
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PhasiHunter: a robust phased siRNA regulatory cascade mining tool based on multiple reference sequences
Published in Bioinformatics, 2023
Recommended citation: Feng Z, Feng J, Zhang B, Fei Y, Zhang, H, Huang J#. PhasiHunter: a robust phased siRNA regulatory cascade mining tool based on multiple reference sequences. Bioinformatics, 39(11): btad676, 2023.
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RASP v2.0: an updated atlas for RNA structure probing data
Published in Nucleic Acids Research, 2025
Recommended citation: Mu K*, Fei Y*,#, Xu Y, Zhang Q C#. RASP v2.0: an updated atlas for RNA structure probing data. Nucleic Acids Research, 53(D1): D211–D219, 2025.
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Predicting small molecule–RNA interactions without RNA tertiary structures
Published in Nature Biotechnology, 2026
Recommended citation: Fei Y*, Wang P*, Zhang J*, Shan X, Cai Z, Ma J, Wang Y#, Zhang Q C#. Predicting small molecule–RNA interactions without RNA tertiary structures. Nature Biotechnology, 2026, Online.
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talks
Honors & Awards
Published:
- Best Presenter, the 3rd Postdoctoral Forum on “Life Sciences, Medicine, and Pharmacy”, Tsinghua University, 2023
- Best Poster, the 3rd Postdoctoral Forum on “Life Sciences, Medicine, and Pharmacy”, Tsinghua University, 2023
- Gold Award for Poster, Cold Spring Harbor Asia Conference, “RNA Therapeutics: Current Status and Future”, 2023
- Outstanding Postdoctoral Fellowship, Postdoctoral Foundation of Tsinghua-Peking Center for Life Sciences, 2023
- Distinguished Postdoctoral Fellowship, Postdoctoral Foundation of Tsinghua-Peking Center for Life Sciences, 2021
- Outstanding Graduate Thesis, Nanjing Agricultural University, 2020
- Outstanding Graduate, Nanjing Agricultural University, 2019
- Innovation Project for Doctoral Thesis (Class I), Nanjing Agricultural University, 2019
- Presidential Scholarship, Nanjing Agricultural University, 2018
- Zhongshan Scholar Research Star Award, Nanjing Agricultural University, 2018
- Outstanding Volunteer, Nanjing Agricultural University, 2016
- Outstanding Graduate Student Leader, Nanjing Agricultural University, 2016
- First-Class Academic Scholarship for Students, Nanjing Agricultural University, 2016, 2017, and 2018
- First-Class Academic Scholarship for Students, Nanjing Agricultural University, 2014 and 2015
- Outstanding in Mid-Term Assessment for Students, Nanjing Agricultural University, 2015 and 2017
Conference Talks
Published:
- The 13th National Ribonucleic Acid (RNA) Symposium, Chengdu, Sichuan, 2025-12
- The 1st National Conference on Artificial Intelligence in Biology, Hangzhou, Zhejiang, 2025-6
teaching
Teaching experience 1
Undergraduate course, University 1, Department, 2014
This is a description of a teaching experience. You can use markdown like any other post.
Teaching experience 2
Workshop, University 1, Department, 2015
This is a description of a teaching experience. You can use markdown like any other post.